Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rftn2Q8CHX7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rftn2Q8CHX7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rftn2Q8CHX7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Gm7461-201ENSMUST00000058918 827 ntBASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.38■□□□□ 0.37
Rftn2Q8CHX7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.37■□□□□ 0.37
Rftn2Q8CHX7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rftn2Q8CHX7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rftn2Q8CHX7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rftn2Q8CHX7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rftn2Q8CHX7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rftn2Q8CHX7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms