Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Gm36967-201ENSMUST00000193814 266 ntBASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rdh1Q8CGV4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rdh1Q8CGV4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rdh1Q8CGV4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Rdh1Q8CGV4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rdh1Q8CGV4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rdh1Q8CGV4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms