Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
ShfQ8CG80 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.65□□□□□ -0.06
ShfQ8CG80 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ShfQ8CG80 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
ShfQ8CG80 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.64□□□□□ -0.07
ShfQ8CG80 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gm8520-201ENSMUST00000186517 868 ntBASIC14.64□□□□□ -0.07
ShfQ8CG80 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ShfQ8CG80 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.63□□□□□ -0.07
ShfQ8CG80 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Mir5122-201ENSMUST00000175004 89 ntBASIC14.63□□□□□ -0.07
ShfQ8CG80 Gm36967-201ENSMUST00000193814 266 ntBASIC14.63□□□□□ -0.07
ShfQ8CG80 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.63□□□□□ -0.07
ShfQ8CG80 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ShfQ8CG80 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
ShfQ8CG80 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ShfQ8CG80 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms