Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc5Q8CG46 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc5Q8CG46 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smc5Q8CG46 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.33■□□□□ 0.84
Smc5Q8CG46 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc5Q8CG46 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.32■□□□□ 0.84
Smc5Q8CG46 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc5Q8CG46 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.31■□□□□ 0.84
Smc5Q8CG46 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Gm18421-201ENSMUST00000204122 625 ntBASIC20.31■□□□□ 0.84
Smc5Q8CG46 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc5Q8CG46 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.3■□□□□ 0.84
Smc5Q8CG46 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Gm15039-201ENSMUST00000118914 875 ntBASIC20.3■□□□□ 0.84
Smc5Q8CG46 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.3■□□□□ 0.84
Smc5Q8CG46 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc5Q8CG46 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Gm27463-201ENSMUST00000183569 57 ntBASIC20.29■□□□□ 0.84
Smc5Q8CG46 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc5Q8CG46 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.28■□□□□ 0.84
Smc5Q8CG46 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.28■□□□□ 0.84
Smc5Q8CG46 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms