Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb7Q8CDY9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb7Q8CDY9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb7Q8CDY9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb7Q8CDY9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms