Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim52Q8CDV4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trim52Q8CDV4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim52Q8CDV4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim52Q8CDV4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim52Q8CDV4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trim52Q8CDV4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim52Q8CDV4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim52Q8CDV4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim52Q8CDV4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm6550-201ENSMUST00000187574 993 ntBASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm5364-201ENSMUST00000216789 889 ntBASIC20.17■□□□□ 0.82
Trim52Q8CDV4 AV026068-213ENSMUST00000223675 1171 ntBASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim52Q8CDV4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim52Q8CDV4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms