Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vcpip1Q8CDG3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vcpip1Q8CDG3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vcpip1Q8CDG3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vcpip1Q8CDG3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vcpip1Q8CDG3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vcpip1Q8CDG3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcpip1Q8CDG3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcpip1Q8CDG3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms