Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ufl1Q8CCJ3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ufl1Q8CCJ3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ufl1Q8CCJ3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ufl1Q8CCJ3 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.64■□□□□ 0.74
Ufl1Q8CCJ3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Ufl1Q8CCJ3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Gm25745-201ENSMUST00000174945 133 ntBASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Rps4l-201ENSMUST00000071745 943 ntBASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ufl1Q8CCJ3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Gm6296-201ENSMUST00000222599 943 ntBASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ufl1Q8CCJ3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ufl1Q8CCJ3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ufl1Q8CCJ3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Gm7506-201ENSMUST00000207758 815 ntBASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Gm6376-201ENSMUST00000209407 580 ntBASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ufl1Q8CCJ3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms