Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc46a2Q8CA03 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Asic1-205ENSMUST00000228185 1818 ntBASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc46a2Q8CA03 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm27275-201ENSMUST00000184318 272 ntBASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm18666-201ENSMUST00000190039 958 ntBASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.78■□□□□ 0.12
Slc46a2Q8CA03 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc46a2Q8CA03 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Slc46a2Q8CA03 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc46a2Q8CA03 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Slc46a2Q8CA03 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc46a2Q8CA03 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc46a2Q8CA03 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Gm7638-201ENSMUST00000121348 967 ntBASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Gm20049-201ENSMUST00000219950 730 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms