Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm11950-201ENSMUST00000121615 838 ntBASIC17.31■□□□□ 0.36
Uba3Q8C878 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Uba3Q8C878 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uba3Q8C878 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.3■□□□□ 0.36
Uba3Q8C878 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Uba3Q8C878 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uba3Q8C878 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Uba3Q8C878 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Uba3Q8C878 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.29■□□□□ 0.36
Uba3Q8C878 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.29■□□□□ 0.36
Uba3Q8C878 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Uba3Q8C878 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Uba3Q8C878 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.29■□□□□ 0.36
Uba3Q8C878 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.29■□□□□ 0.36
Uba3Q8C878 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uba3Q8C878 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Uba3Q8C878 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Uba3Q8C878 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.28■□□□□ 0.36
Uba3Q8C878 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Uba3Q8C878 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Uba3Q8C878 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Uba3Q8C878 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uba3Q8C878 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.27■□□□□ 0.36
Uba3Q8C878 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.27■□□□□ 0.36
Uba3Q8C878 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Uba3Q8C878 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.27■□□□□ 0.36
Uba3Q8C878 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uba3Q8C878 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Uba3Q8C878 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Uba3Q8C878 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Uba3Q8C878 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Uba3Q8C878 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.26■□□□□ 0.35
Uba3Q8C878 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.26■□□□□ 0.35
Uba3Q8C878 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Uba3Q8C878 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.26■□□□□ 0.35
Uba3Q8C878 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Uba3Q8C878 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uba3Q8C878 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Uba3Q8C878 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms