Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc60Q8C4J0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc60Q8C4J0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc60Q8C4J0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc60Q8C4J0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Gm33142-201ENSMUST00000193913 867 ntBASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc60Q8C4J0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc60Q8C4J0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Gm45328-201ENSMUST00000210942 917 ntBASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc60Q8C4J0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc60Q8C4J0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Ccdc60Q8C4J0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms