Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp44Q8C2S0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp44Q8C2S0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp44Q8C2S0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp44Q8C2S0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp44Q8C2S0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms