Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Gm11927-201ENSMUST00000118472 759 ntBASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Zfp783-201ENSMUST00000095946 670 ntBASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tsen54Q8C2A2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Gm11249-201ENSMUST00000117071 859 ntBASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tsen54Q8C2A2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tsen54Q8C2A2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Gm8520-201ENSMUST00000186517 868 ntBASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Gm38285-201ENSMUST00000192928 922 ntBASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tsen54Q8C2A2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.76□□□□□ -0.21
Tsen54Q8C2A2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms