Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gm11336-201ENSMUST00000118168 334 ntBASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gm22697-201ENSMUST00000175194 63 ntBASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gm18032-201ENSMUST00000222541 538 ntBASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3rf3Q8C120 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Gm21559-201ENSMUST00000220638 855 ntBASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Gm8587-201ENSMUST00000076538 843 ntBASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh3rf3Q8C120 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Gm18421-201ENSMUST00000204122 625 ntBASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf3Q8C120 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf3Q8C120 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms