Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpne3Q8BT60 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Mir5122-201ENSMUST00000175004 89 ntBASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Gm27463-201ENSMUST00000183569 57 ntBASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cpne3Q8BT60 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Dancr-204ENSMUST00000132389 2347 ntBASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpne3Q8BT60 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpne3Q8BT60 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Gm21814-202ENSMUST00000203277 873 ntBASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cpne3Q8BT60 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms