Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ppp1r3eQ8BRJ4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.38■□□□□ 0.05
Ppp1r3eQ8BRJ4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ppp1r3eQ8BRJ4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Actl10-202ENSMUST00000226583 1501 ntBASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ppp1r3eQ8BRJ4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gm10698-201ENSMUST00000182663 604 ntBASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ppp1r3eQ8BRJ4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms