Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smco3Q8BQM7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Gm6211-202ENSMUST00000167849 925 ntBASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smco3Q8BQM7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smco3Q8BQM7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Gm42642-201ENSMUST00000200683 355 ntBASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms