Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col16a1Q8BLX7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col16a1Q8BLX7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Gm14057-201ENSMUST00000120631 482 ntBASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Gm8396-201ENSMUST00000057361 823 ntBASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col16a1Q8BLX7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Gm27300-201ENSMUST00000184085 97 ntBASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Gm27335-201ENSMUST00000184758 97 ntBASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Gm18622-201ENSMUST00000219361 595 ntBASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col16a1Q8BLX7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC21.4■■□□□ 1.02
Col16a1Q8BLX7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col16a1Q8BLX7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col16a1Q8BLX7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col16a1Q8BLX7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC21.39■■□□□ 1.01
Col16a1Q8BLX7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col16a1Q8BLX7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col16a1Q8BLX7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col16a1Q8BLX7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Gm14701-201ENSMUST00000117156 348 ntBASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Gm13597-201ENSMUST00000121239 375 ntBASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms