Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2bQ8BJF9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Timm23-208ENSMUST00000226683 750 ntBASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chmp2bQ8BJF9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2bQ8BJF9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms