Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trnp1Q80ZI1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trnp1Q80ZI1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trnp1Q80ZI1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Gm17271-201ENSMUST00000165535 355 ntBASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trnp1Q80ZI1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnp1Q80ZI1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Gm27300-201ENSMUST00000184085 97 ntBASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Gm27335-201ENSMUST00000184758 97 ntBASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Trnp1Q80ZI1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Gm45167-201ENSMUST00000208007 322 ntBASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trnp1Q80ZI1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trnp1Q80ZI1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms