Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nucks1Q80XU3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Nucks1Q80XU3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.55■□□□□ 0.4
Nucks1Q80XU3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nucks1Q80XU3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nucks1Q80XU3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nucks1Q80XU3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms