Protein–RNA interactions for Protein: Q80XD1

Chn2, Beta-chimaerin, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chn2Q80XD1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chn2Q80XD1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.33■□□□□ 0.36
Chn2Q80XD1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.33■□□□□ 0.36
Chn2Q80XD1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chn2Q80XD1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.32■□□□□ 0.36
Chn2Q80XD1 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.32■□□□□ 0.36
Chn2Q80XD1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.32■□□□□ 0.36
Chn2Q80XD1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chn2Q80XD1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.31■□□□□ 0.36
Chn2Q80XD1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Dancr-204ENSMUST00000132389 2347 ntBASIC17.31■□□□□ 0.36
Chn2Q80XD1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Gm15794-201ENSMUST00000120182 631 ntBASIC17.31■□□□□ 0.36
Chn2Q80XD1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chn2Q80XD1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.3■□□□□ 0.36
Chn2Q80XD1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chn2Q80XD1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chn2Q80XD1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms