Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prdm4Q80V63 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Gm11249-201ENSMUST00000117071 859 ntBASIC17.11■□□□□ 0.33
Prdm4Q80V63 Mir2861-201ENSMUST00000175539 82 ntBASIC17.11■□□□□ 0.33
Prdm4Q80V63 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.11■□□□□ 0.33
Prdm4Q80V63 Gm18666-201ENSMUST00000190039 958 ntBASIC17.11■□□□□ 0.33
Prdm4Q80V63 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prdm4Q80V63 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.1■□□□□ 0.33
Prdm4Q80V63 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prdm4Q80V63 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.09■□□□□ 0.33
Prdm4Q80V63 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.09■□□□□ 0.33
Prdm4Q80V63 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm4Q80V63 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm4Q80V63 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Gm15375-201ENSMUST00000119510 849 ntBASIC17.08■□□□□ 0.32
Prdm4Q80V63 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Mir7071-201ENSMUST00000184847 69 ntBASIC17.08■□□□□ 0.32
Prdm4Q80V63 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm4Q80V63 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms