Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.09■□□□□ 0.17
Pcdh19Q80TF3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Pcdh19Q80TF3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh19Q80TF3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh19Q80TF3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh19Q80TF3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms