Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.11■□□□□ 0.01
Pif1Q80SX8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pif1Q80SX8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.1■□□□□ 0.01
Pif1Q80SX8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pif1Q80SX8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm27867-201ENSMUST00000184778 125 ntBASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm6376-201ENSMUST00000209407 580 ntBASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.09■□□□□ 0.01
Pif1Q80SX8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pif1Q80SX8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pif1Q80SX8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.08■□□□□ 0
Pif1Q80SX8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.08■□□□□ 0
Pif1Q80SX8 Gm2651-201ENSMUST00000203560 838 ntBASIC15.08■□□□□ 0
Pif1Q80SX8 Gm18206-201ENSMUST00000207027 926 ntBASIC15.08■□□□□ 0
Pif1Q80SX8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.08■□□□□ 0
Pif1Q80SX8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.08■□□□□ 0
Pif1Q80SX8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Pif1Q80SX8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pif1Q80SX8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pif1Q80SX8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pif1Q80SX8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms