Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh8Q7TSK3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh8Q7TSK3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh8Q7TSK3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh8Q7TSK3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh8Q7TSK3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdh8Q7TSK3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms