Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Gm37292-201ENSMUST00000192062 758 ntBASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdp1Q7TSG2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Gm715-201ENSMUST00000117865 831 ntBASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Gm24841-201ENSMUST00000158676 357 ntBASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdp1Q7TSG2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.92■□□□□ 0.46
Ctdp1Q7TSG2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdp1Q7TSG2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdp1Q7TSG2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdp1Q7TSG2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdp1Q7TSG2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms