Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.99■□□□□ 0.31
Cspg5Q71M36 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.98■□□□□ 0.31
Cspg5Q71M36 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Gm11336-201ENSMUST00000118168 334 ntBASIC16.98■□□□□ 0.31
Cspg5Q71M36 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Gm18733-201ENSMUST00000173950 856 ntBASIC16.98■□□□□ 0.31
Cspg5Q71M36 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.98■□□□□ 0.31
Cspg5Q71M36 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg5Q71M36 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.97■□□□□ 0.31
Cspg5Q71M36 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.97■□□□□ 0.31
Cspg5Q71M36 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.97■□□□□ 0.31
Cspg5Q71M36 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gm18206-201ENSMUST00000207027 926 ntBASIC16.96■□□□□ 0.31
Cspg5Q71M36 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cspg5Q71M36 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.96■□□□□ 0.3
Cspg5Q71M36 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.95■□□□□ 0.3
Cspg5Q71M36 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg5Q71M36 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms