Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm1818-201ENSMUST00000169406 1184 ntBASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm14494-201ENSMUST00000118786 435 ntBASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm7862-201ENSMUST00000121461 292 ntBASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne1Q6ZWR6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm13312-201ENSMUST00000119631 718 ntBASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm6089-201ENSMUST00000197666 938 ntBASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 AC122351.1-201ENSMUST00000220467 126 ntBASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 AC159093.1-201ENSMUST00000227779 380 ntBASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm13418-201ENSMUST00000119097 944 ntBASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne1Q6ZWR6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms