Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.56■□□□□ 0.4
CtifQ6PEE2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.56■□□□□ 0.4
CtifQ6PEE2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.56■□□□□ 0.4
CtifQ6PEE2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CtifQ6PEE2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.55■□□□□ 0.4
CtifQ6PEE2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.55■□□□□ 0.4
CtifQ6PEE2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.55■□□□□ 0.4
CtifQ6PEE2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CtifQ6PEE2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.55■□□□□ 0.4
CtifQ6PEE2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.54■□□□□ 0.4
CtifQ6PEE2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.54■□□□□ 0.4
CtifQ6PEE2 Gm9988-201ENSMUST00000069786 435 ntBASIC17.54■□□□□ 0.4
CtifQ6PEE2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.54■□□□□ 0.4
CtifQ6PEE2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CtifQ6PEE2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.53■□□□□ 0.4
CtifQ6PEE2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CtifQ6PEE2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms