Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Gm7222-201ENSMUST00000117512 906 ntBASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snrnp40Q6PE01 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Gm9172-201ENSMUST00000212092 954 ntBASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snrnp40Q6PE01 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snrnp40Q6PE01 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms