Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Chd4Q6PDQ2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.33■■□□□ 1.01
Chd4Q6PDQ2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Chd4Q6PDQ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd4Q6PDQ2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd4Q6PDQ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Chd4Q6PDQ2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.33■■□□□ 1
Chd4Q6PDQ2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Chd4Q6PDQ2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.32■■□□□ 1
Chd4Q6PDQ2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.32■■□□□ 1
Chd4Q6PDQ2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Chd4Q6PDQ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gm13216-201ENSMUST00000117145 591 ntBASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gm7222-201ENSMUST00000117512 906 ntBASIC21.31■■□□□ 1
Chd4Q6PDQ2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.31■■□□□ 1
Chd4Q6PDQ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd4Q6PDQ2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chd4Q6PDQ2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Chd4Q6PDQ2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm8825-201ENSMUST00000182565 998 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm4518-201ENSMUST00000182638 718 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.29■■□□□ 1
Chd4Q6PDQ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Chd4Q6PDQ2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms