Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Abcf1Q6P542 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.39■□□□□ 0.54
Abcf1Q6P542 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abcf1Q6P542 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abcf1Q6P542 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcf1Q6P542 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Gm38027-201ENSMUST00000192315 235 ntBASIC18.38■□□□□ 0.53
Abcf1Q6P542 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcf1Q6P542 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcf1Q6P542 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.36■□□□□ 0.53
Abcf1Q6P542 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.36■□□□□ 0.53
Abcf1Q6P542 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcf1Q6P542 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms