Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dancr-204ENSMUST00000132389 2347 ntBASIC16.67■□□□□ 0.26
Sp140Q6NSQ5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Gm11336-201ENSMUST00000118168 334 ntBASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sp140Q6NSQ5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Mir1668-201ENSMUST00000184114 107 ntBASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.65■□□□□ 0.26
Sp140Q6NSQ5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sp140Q6NSQ5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Gm26039-201ENSMUST00000158152 144 ntBASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sp140Q6NSQ5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms