Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Clcn1Q64347 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Gm11779-201ENSMUST00000118541 368 ntBASIC20.7■□□□□ 0.9
Clcn1Q64347 Gm13418-201ENSMUST00000119097 944 ntBASIC20.7■□□□□ 0.9
Clcn1Q64347 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.7■□□□□ 0.9
Clcn1Q64347 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.7■□□□□ 0.9
Clcn1Q64347 Gm44487-201ENSMUST00000205145 325 ntBASIC20.7■□□□□ 0.9
Clcn1Q64347 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.7■□□□□ 0.9
Clcn1Q64347 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.7■□□□□ 0.9
Clcn1Q64347 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Clcn1Q64347 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.69■□□□□ 0.9
Clcn1Q64347 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clcn1Q64347 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.69■□□□□ 0.9
Clcn1Q64347 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.69■□□□□ 0.9
Clcn1Q64347 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn1Q64347 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clcn1Q64347 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.68■□□□□ 0.9
Clcn1Q64347 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.68■□□□□ 0.9
Clcn1Q64347 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.68■□□□□ 0.9
Clcn1Q64347 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Clcn1Q64347 Mir5126-201ENSMUST00000175513 77 ntBASIC20.68■□□□□ 0.9
Clcn1Q64347 Gm8000-201ENSMUST00000188378 592 ntBASIC20.68■□□□□ 0.9
Clcn1Q64347 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.68■□□□□ 0.9
Clcn1Q64347 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.68■□□□□ 0.9
Clcn1Q64347 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Clcn1Q64347 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn1Q64347 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.67■□□□□ 0.9
Clcn1Q64347 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clcn1Q64347 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.67■□□□□ 0.9
Clcn1Q64347 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Clcn1Q64347 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clcn1Q64347 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.67■□□□□ 0.9
Clcn1Q64347 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn1Q64347 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Clcn1Q64347 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.66■□□□□ 0.9
Clcn1Q64347 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Clcn1Q64347 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Clcn1Q64347 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clcn1Q64347 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.66■□□□□ 0.9
Clcn1Q64347 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.66■□□□□ 0.9
Clcn1Q64347 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn1Q64347 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Clcn1Q64347 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.65■□□□□ 0.9
Clcn1Q64347 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.65■□□□□ 0.9
Clcn1Q64347 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.65■□□□□ 0.9
Clcn1Q64347 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms