Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.57□□□□□ -0.24
Col7a1Q63870 Gm12151-201ENSMUST00000121374 290 ntBASIC13.57□□□□□ -0.24
Col7a1Q63870 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.57□□□□□ -0.24
Col7a1Q63870 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.57□□□□□ -0.24
Col7a1Q63870 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.57□□□□□ -0.24
Col7a1Q63870 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.57□□□□□ -0.24
Col7a1Q63870 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.57□□□□□ -0.24
Col7a1Q63870 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col7a1Q63870 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col7a1Q63870 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.56□□□□□ -0.24
Col7a1Q63870 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.56□□□□□ -0.24
Col7a1Q63870 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.56□□□□□ -0.24
Col7a1Q63870 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.56□□□□□ -0.24
Col7a1Q63870 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.56□□□□□ -0.24
Col7a1Q63870 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.56□□□□□ -0.24
Col7a1Q63870 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.56□□□□□ -0.24
Col7a1Q63870 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col7a1Q63870 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.56□□□□□ -0.24
Col7a1Q63870 Mir7684-201ENSMUST00000183858 60 ntBASIC13.56□□□□□ -0.24
Col7a1Q63870 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.56□□□□□ -0.24
Col7a1Q63870 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Col7a1Q63870 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col7a1Q63870 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col7a1Q63870 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.55□□□□□ -0.24
Col7a1Q63870 Gm15487-201ENSMUST00000122373 465 ntBASIC13.55□□□□□ -0.24
Col7a1Q63870 Gm45167-201ENSMUST00000208007 322 ntBASIC13.55□□□□□ -0.24
Col7a1Q63870 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.55□□□□□ -0.24
Col7a1Q63870 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col7a1Q63870 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col7a1Q63870 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.54□□□□□ -0.24
Col7a1Q63870 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Gm5779-201ENSMUST00000218467 910 ntBASIC13.54□□□□□ -0.24
Col7a1Q63870 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 BC021767-201ENSMUST00000126387 1716 ntBASIC13.54□□□□□ -0.24
Col7a1Q63870 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Col7a1Q63870 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col7a1Q63870 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Gm14719-201ENSMUST00000121891 340 ntBASIC13.53□□□□□ -0.24
Col7a1Q63870 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col7a1Q63870 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col7a1Q63870 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms