Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Vamp1Q62442 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vamp1Q62442 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.1□□□□□ -0.15
Vamp1Q62442 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vamp1Q62442 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vamp1Q62442 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vamp1Q62442 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vamp1Q62442 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vamp1Q62442 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vamp1Q62442 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vamp1Q62442 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vamp1Q62442 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vamp1Q62442 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vamp1Q62442 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.08□□□□□ -0.16
Vamp1Q62442 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Gm11643-201ENSMUST00000119578 864 ntBASIC14.08□□□□□ -0.16
Vamp1Q62442 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vamp1Q62442 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vamp1Q62442 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Vamp1Q62442 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.07□□□□□ -0.16
Vamp1Q62442 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.07□□□□□ -0.16
Vamp1Q62442 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms