Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.36■□□□□ 0.05
VcanQ62059 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
VcanQ62059 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Gm7222-201ENSMUST00000117512 906 ntBASIC15.36■□□□□ 0.05
VcanQ62059 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.36■□□□□ 0.05
VcanQ62059 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.36■□□□□ 0.05
VcanQ62059 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.36■□□□□ 0.05
VcanQ62059 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.36■□□□□ 0.05
VcanQ62059 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VcanQ62059 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VcanQ62059 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.35■□□□□ 0.05
VcanQ62059 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.35■□□□□ 0.05
VcanQ62059 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
VcanQ62059 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.35■□□□□ 0.05
VcanQ62059 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Mir6990-201ENSMUST00000183724 91 ntBASIC15.35■□□□□ 0.05
VcanQ62059 Gm43474-201ENSMUST00000196415 774 ntBASIC15.35■□□□□ 0.05
VcanQ62059 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
VcanQ62059 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VcanQ62059 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.35■□□□□ 0.05
VcanQ62059 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.34■□□□□ 0.05
VcanQ62059 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.34■□□□□ 0.05
VcanQ62059 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.34■□□□□ 0.05
VcanQ62059 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VcanQ62059 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.34■□□□□ 0.05
VcanQ62059 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VcanQ62059 Gm13365-201ENSMUST00000121188 973 ntBASIC15.33■□□□□ 0.05
VcanQ62059 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VcanQ62059 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VcanQ62059 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.33■□□□□ 0.05
VcanQ62059 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.33■□□□□ 0.05
VcanQ62059 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VcanQ62059 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
VcanQ62059 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VcanQ62059 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.33■□□□□ 0.04
VcanQ62059 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.33■□□□□ 0.04
VcanQ62059 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.33■□□□□ 0.04
VcanQ62059 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
VcanQ62059 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.33■□□□□ 0.04
VcanQ62059 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VcanQ62059 Gm4899-201ENSMUST00000178708 719 ntBASIC15.33■□□□□ 0.04
VcanQ62059 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VcanQ62059 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VcanQ62059 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
VcanQ62059 Gm6007-201ENSMUST00000208170 823 ntBASIC15.32■□□□□ 0.04
VcanQ62059 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VcanQ62059 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Mir1895-201ENSMUST00000122615 79 ntBASIC15.32■□□□□ 0.04
VcanQ62059 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.32■□□□□ 0.04
VcanQ62059 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
VcanQ62059 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.32■□□□□ 0.04
VcanQ62059 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VcanQ62059 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VcanQ62059 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms