Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Foxc1Q61572 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.07□□□□□ -0.48
Foxc1Q61572 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.07□□□□□ -0.48
Foxc1Q61572 Gm18032-201ENSMUST00000222541 538 ntBASIC12.07□□□□□ -0.48
Foxc1Q61572 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Foxc1Q61572 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.07□□□□□ -0.48
Foxc1Q61572 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Foxc1Q61572 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxc1Q61572 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.06□□□□□ -0.48
Foxc1Q61572 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Mir1668-201ENSMUST00000184114 107 ntBASIC12.06□□□□□ -0.48
Foxc1Q61572 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Foxc1Q61572 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Foxc1Q61572 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Foxc1Q61572 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Gm6345-202ENSMUST00000180900 204 ntBASIC12.05□□□□□ -0.48
Foxc1Q61572 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Foxc1Q61572 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Foxc1Q61572 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Foxc1Q61572 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Foxc1Q61572 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Foxc1Q61572 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Foxc1Q61572 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms