Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccne1Q61457 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.29■■□□□ 1
Ccne1Q61457 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccne1Q61457 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Ccne1Q61457 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccne1Q61457 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Gm25406-201ENSMUST00000157599 105 ntBASIC21.28■■□□□ 1
Ccne1Q61457 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.28■■□□□ 1
Ccne1Q61457 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
Ccne1Q61457 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Ccne1Q61457 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccne1Q61457 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccne1Q61457 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Ccne1Q61457 Gm6550-201ENSMUST00000187574 993 ntBASIC21.27■■□□□ 1
Ccne1Q61457 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.27■■□□□ 1
Ccne1Q61457 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.27■■□□□ 1
Ccne1Q61457 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.27■■□□□ 1
Ccne1Q61457 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccne1Q61457 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Ccne1Q61457 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccne1Q61457 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccne1Q61457 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Ccne1Q61457 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Gm5264-201ENSMUST00000190584 848 ntBASIC21.26■□□□□ 0.99
Ccne1Q61457 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccne1Q61457 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.25■□□□□ 0.99
Ccne1Q61457 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccne1Q61457 Gm8655-201ENSMUST00000221159 852 ntBASIC21.25■□□□□ 0.99
Ccne1Q61457 AV026068-213ENSMUST00000223675 1171 ntBASIC21.25■□□□□ 0.99
Ccne1Q61457 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.25■□□□□ 0.99
Ccne1Q61457 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.25■□□□□ 0.99
Ccne1Q61457 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccne1Q61457 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.24■□□□□ 0.99
Ccne1Q61457 Gm9172-201ENSMUST00000212092 954 ntBASIC21.24■□□□□ 0.99
Ccne1Q61457 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.24■□□□□ 0.99
Ccne1Q61457 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.24■□□□□ 0.99
Ccne1Q61457 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms