Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.15■□□□□ 0.02
Clcn4Q61418 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcn4Q61418 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn4Q61418 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.14■□□□□ 0.01
Clcn4Q61418 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn4Q61418 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn4Q61418 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Clcn4Q61418 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Clcn4Q61418 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Clcn4Q61418 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.13■□□□□ 0.01
Clcn4Q61418 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.13■□□□□ 0.01
Clcn4Q61418 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.13■□□□□ 0.01
Clcn4Q61418 Il3ra-202ENSMUST00000223589 738 ntBASIC15.13■□□□□ 0.01
Clcn4Q61418 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Clcn4Q61418 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Clcn4Q61418 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn4Q61418 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Clcn4Q61418 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clcn4Q61418 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcn4Q61418 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clcn4Q61418 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcn4Q61418 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms