Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scnn1aQ61180 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scnn1aQ61180 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scnn1aQ61180 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scnn1aQ61180 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.83■□□□□ 0.61
Scnn1aQ61180 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Scnn1aQ61180 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scnn1aQ61180 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Scnn1aQ61180 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Gm25406-201ENSMUST00000157599 105 ntBASIC18.83■□□□□ 0.6
Scnn1aQ61180 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.83■□□□□ 0.6
Scnn1aQ61180 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.83■□□□□ 0.6
Scnn1aQ61180 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.83■□□□□ 0.6
Scnn1aQ61180 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.83■□□□□ 0.6
Scnn1aQ61180 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scnn1aQ61180 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Gm12497-201ENSMUST00000138778 237 ntBASIC18.82■□□□□ 0.6
Scnn1aQ61180 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scnn1aQ61180 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Gm18733-201ENSMUST00000173950 856 ntBASIC18.81■□□□□ 0.6
Scnn1aQ61180 Mir6404-201ENSMUST00000183699 94 ntBASIC18.81■□□□□ 0.6
Scnn1aQ61180 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scnn1aQ61180 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.8■□□□□ 0.6
Scnn1aQ61180 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scnn1aQ61180 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm9172-201ENSMUST00000212092 954 ntBASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.8■□□□□ 0.6
Scnn1aQ61180 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scnn1aQ61180 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scnn1aQ61180 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms