Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Sdf4Q61112 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdf4Q61112 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Sdf4Q61112 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.64■□□□□ 0.26
Sdf4Q61112 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdf4Q61112 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sdf4Q61112 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sdf4Q61112 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdf4Q61112 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sdf4Q61112 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.62■□□□□ 0.25
Sdf4Q61112 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sdf4Q61112 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sdf4Q61112 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.62■□□□□ 0.25
Sdf4Q61112 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.62■□□□□ 0.25
Sdf4Q61112 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sdf4Q61112 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
Sdf4Q61112 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.61■□□□□ 0.25
Sdf4Q61112 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.61■□□□□ 0.25
Sdf4Q61112 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms