Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp13a4Q5XF90 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Gm9013-201ENSMUST00000132939 882 ntBASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Gm5587-201ENSMUST00000206270 674 ntBASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp13a4Q5XF90 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.74■□□□□ 0.43
Atp13a4Q5XF90 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atp13a4Q5XF90 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atp13a4Q5XF90 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms