Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm29707-201ENSMUST00000196325 491 ntBASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim38Q5SZ99 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Mir6982-201ENSMUST00000184354 68 ntBASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim38Q5SZ99 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim38Q5SZ99 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim38Q5SZ99 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim38Q5SZ99 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Gm6433-201ENSMUST00000118634 875 ntBASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Gm27389-201ENSMUST00000183622 195 ntBASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim38Q5SZ99 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim38Q5SZ99 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim38Q5SZ99 Gm45412-201ENSMUST00000210217 2275 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms