Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Olfr129-201ENSMUST00000122318 993 ntBASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Gm10052-201ENSMUST00000168019 960 ntBASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Gm17971-201ENSMUST00000190239 806 ntBASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Gm7729-201ENSMUST00000050143 801 ntBASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav2Q5R1I9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.09□□□□□ -0.31
Trav2Q5R1I9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav2Q5R1I9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.08□□□□□ -0.31
Trav2Q5R1I9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav2Q5R1I9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav2Q5R1I9 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Gm7153-201ENSMUST00000117092 455 ntBASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav2Q5R1I9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms