Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-1Q5R1I8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-1Q5R1I8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-1Q5R1I8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-1Q5R1I8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-1Q5R1I8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav3-1Q5R1I8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 AC151971.4-201ENSMUST00000214717 704 ntBASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-1Q5R1I8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms