Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav6-2Q5R1I4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Mir5131-201ENSMUST00000175426 93 ntBASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Gm10060-201ENSMUST00000212002 111 ntBASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-2Q5R1I4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-2Q5R1I4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Gm5867-201ENSMUST00000063197 592 ntBASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-2Q5R1I4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms