Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trav6d-4Q5R1I0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-4Q5R1I0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-4Q5R1I0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms