Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav5d-4Q5R1F6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Gm15565-201ENSMUST00000118890 427 ntBASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Gm7889-201ENSMUST00000185591 958 ntBASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Actl10-202ENSMUST00000226583 1501 ntBASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5d-4Q5R1F6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Mir6982-201ENSMUST00000184354 68 ntBASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Gm10566-201ENSMUST00000086739 996 ntBASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav5d-4Q5R1F6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Mir5130-201ENSMUST00000175160 84 ntBASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav5d-4Q5R1F6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms